EnhancerDB
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  3. rs12202778[chr6:30769057]
Enhancers that have rs12202778[chr6:30769057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12202778[chr6:30769057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30769052 30769062 SREBF1 JASPAR yes 101051971
chr6 30769052 30769062 SREBF2 JASPAR yes 101051972
chr6 30769053 30769061 MGA JASPAR yes 101051973
Genes associated with rs12202778[chr6:30769057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More