EnhancerDB
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  3. rs12208591[chr6:130004377]
Enhancers that have rs12208591[chr6:130004377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 129979065 130028095 enh9353
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12208591[chr6:130004377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 130004368 130004378 SP1 JASPAR yes 105147283
chr6 130004368 130004387 PAX5 JASPAR yes 105147284
Genes associated with rs12208591[chr6:130004377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 130465460 130686570 - SAMD3 ENSG00000164483.12 130686570 461083 Esophagus 0.170924 6947