EnhancerDB
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  3. rs12209725[chr6:30777849]
Enhancers that have rs12209725[chr6:30777849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12209725[chr6:30777849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30777844 30777859 MEF2C JASPAR yes 101053294
chr6 30777845 30777860 MEF2A JASPAR yes 101053295
chr6 30777846 30777858 MEF2A JASPAR yes 101053296
chr6 30777846 30777858 MEF2B JASPAR yes 101053297
chr6 30777846 30777858 MEF2D JASPAR yes 101053298
Genes associated with rs12209725[chr6:30777849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More