EnhancerDB
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  3. rs12213493[chr6:30788703]
Enhancers that have rs12213493[chr6:30788703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12213493[chr6:30788703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30788697 30788716 PAX5 JASPAR yes 101054925
chr6 30788701 30788712 NFE2L2 JASPAR yes 101054926
chr6 30788703 30788709 SOX10 JASPAR yes 101054927
Genes associated with rs12213493[chr6:30788703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More