EnhancerDB
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Enhancers that have rs12231959[chr12:96035580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96013625 96050402 enh14919
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12231959[chr12:96035580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96034366 96036712 ZNF274 GTRD no Liver (HepG2) 21567238
chr12 96034467 96036607 ZNF274 GTRD no Cervix (HeLa-S3) 21567239
chr12 96034470 96036741 ZNF143 GTRD no Epithelial (MCF-7) 21567240
chr12 96034495 96036721 ZNF143 GTRD no Epithelial (MCF-7) 21567241
chr12 96034516 96036463 ZNF274 GTRD no Liver (HepG2) 21567242
chr12 96034532 96036358 ZNF274 GTRD no Liver (HepG2) 21567243
chr12 96034544 96036267 ZNF274 GTRD no Cervix (HeLa-S3) 21567244
chr12 96034591 96036624 ZNF143 GTRD no Epithelial (MCF-7) 21567245
chr12 96034594 96036455 ZNF143 GTRD no Epithelial (MCF-7) 21567246
chr12 96034607 96035884 ZNF143 GTRD no Epithelial (MCF-7) 21567247
chr12 96034611 96036175 ZNF143 GTRD no Epithelial (MCF-7) 21567248
chr12 96034614 96035793 ZNF143 GTRD no Epithelial (MCF-7) 21567249
chr12 96034644 96036169 ZNF143 GTRD no Epithelial (MCF-7) 21567250
chr12 96034659 96036409 ZNF274 GTRD no Cervix (HeLa-S3) 21567251
chr12 96034662 96036337 ZNF274 GTRD no Liver (HepG2) 21567252
chr12 96034667 96035961 ZNF143 GTRD no Epithelial (MCF-7) 21567254
chr12 96034858 96036326 ZNF274 GTRD no Liver (HepG2) 21567256
chr12 96034916 96036398 ZNF274 GTRD no Liver (HepG2) 21567258
chr12 96034938 96036390 ZNF143 GTRD no Epithelial (MCF-7) 21567259
chr12 96034991 96036416 ZNF274 GTRD no Cervix (HeLa-S3) 21567260
chr12 96035000 96036274 ZNF143 GTRD no Epithelial (MCF-7) 21567261
chr12 96035019 96036271 ZNF143 GTRD no Epithelial (MCF-7) 21567262
chr12 96035021 96035690 ZNF143 GTRD no Epithelial (MCF-7) 21567263
chr12 96035022 96035920 ZNF274 GTRD no Liver (HepG2) 21567264
chr12 96035045 96036530 ZNF274 GTRD no Liver (HepG2) 21567266
chr12 96035050 96035914 ZNF274 GTRD no Liver (HepG2) 21567267
chr12 96035123 96036508 ZNF274 GTRD no Liver (HepG2) 21567268
chr12 96035125 96036557 ZNF274 GTRD no Liver (HepG2) 21567269
chr12 96035147 96036065 ZNF143 GTRD no Epithelial (MCF-7) 21567270
chr12 96035150 96036452 ZNF143 GTRD no Epithelial (MCF-7) 21567271
chr12 96035152 96036476 ZNF143 GTRD no Epithelial (MCF-7) 21567272
chr12 96035176 96036321 ZNF274 GTRD no Liver (HepG2) 21567273
chr12 96035181 96035956 ZNF274 GTRD no Liver (HepG2) 21567274
chr12 96035195 96036183 ZNF143 GTRD no Epithelial (MCF-7) 21567275
chr12 96035199 96036249 ZNF274 GTRD no Cervix (HeLa-S3) 21567276
chr12 96035201 96036443 ZNF274 GTRD no Liver (HepG2) 21567277
chr12 96035203 96036202 ZNF274 GTRD no Liver (HepG2) 21567278
chr12 96035207 96036333 ZNF274 GTRD no Cervix (HeLa-S3) 21567279
chr12 96035209 96036431 ZNF274 GTRD no Cervix (HeLa-S3) 21567280
chr12 96035225 96036175 ZNF143 GTRD no Epithelial (MCF-7) 21567281
chr12 96035228 96036348 ZNF274 GTRD no Cervix (HeLa-S3) 21567282
chr12 96035236 96036250 ZNF274 GTRD no Liver (HepG2) 21567283
chr12 96035239 96036161 ZNF143 GTRD no Epithelial (MCF-7) 21567284
chr12 96035240 96036108 ZNF143 GTRD no Epithelial (MCF-7) 21567285
chr12 96035241 96036362 ZNF274 GTRD no Liver (HepG2) 21567286
chr12 96035243 96036065 ZNF274 GTRD no Liver (HepG2) 21567287
chr12 96035243 96036338 ZNF274 GTRD no Cervix (HeLa-S3) 21567288
chr12 96035251 96036348 ZNF143 GTRD no Epithelial (MCF-7) 21567289
chr12 96035265 96036598 ZNF274 GTRD no Cervix (HeLa-S3) 21567290
chr12 96035284 96036325 ZNF274 GTRD no Liver (HepG2) 21567291
chr12 96035287 96035911 ZNF143 GTRD no Epithelial (MCF-7) 21567292
chr12 96035287 96035979 ZNF274 GTRD no Liver (HepG2) 21567293
chr12 96035290 96035775 ZNF143 GTRD no Epithelial (MCF-7) 21567294
chr12 96035290 96036417 ZNF274 GTRD no Liver (HepG2) 21567295
chr12 96035294 96036316 ZNF143 GTRD no Epithelial (MCF-7) 21567296
chr12 96035299 96036258 ZNF274 GTRD no Liver (HepG2) 21567297
chr12 96035303 96035935 ZNF274 GTRD no Cervix (HeLa-S3) 21567298
chr12 96035315 96036191 ZNF274 GTRD no Liver (HepG2) 21567299
chr12 96035319 96036308 ZNF274 GTRD no Liver (HepG2) 21567300
chr12 96035325 96036217 ZNF274 GTRD no Liver (HepG2) 21567301
chr12 96035326 96036293 ZNF143 GTRD no Epithelial (MCF-7) 21567302
chr12 96035330 96035825 ZNF274 GTRD no Liver (HepG2) 21567303
chr12 96035334 96036182 ZNF143 GTRD no Epithelial (MCF-7) 21567304
chr12 96035343 96035743 MYOD GTRD no Muscle (Myoblast) 21567305
chr12 96035357 96036246 ZNF274 GTRD no Liver (HepG2) 21567306
chr12 96035365 96036034 ZNF274 GTRD no Liver (HepG2) 21567307
chr12 96035369 96036372 ZNF143 GTRD no Epithelial (MCF-7) 21567308
chr12 96035376 96036212 ZNF274 GTRD no Liver (HepG2) 21567309
chr12 96035378 96036244 ZNF143 GTRD no Epithelial (MCF-7) 21567310
chr12 96035403 96036308 ZNF143 GTRD no Epithelial (MCF-7) 21567311
chr12 96035410 96035582 ZNF143 GTRD no Epithelial (MCF-7) 21567312
chr12 96035429 96036278 ZNF143 GTRD no Epithelial (MCF-7) 21567313
chr12 96035461 96036104 CTCF GTRD no Spleen 21567314
chr12 96035479 96035853 ZNF274 GTRD no Liver (HepG2) 21567315
chr12 96035501 96036306 ZNF274 GTRD no Liver (HepG2) 21567316
chr12 96035523 96036279 ZNF143 GTRD no Epithelial (MCF-7) 21567317
chr12 96035567 96035588 REST JASPAR yes 123012052
Genes associated with rs12231959[chr12:96035580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More