EnhancerDB
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  3. rs12245616[chr10:95199589]
Enhancers that have rs12245616[chr10:95199589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 95190385 95209175 enh13411
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12245616[chr10:95199589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 95199583 95199598 ZIC3 JASPAR yes 129211377
chr10 95199583 95199598 ZIC4 JASPAR yes 129211378
chr10 95199584 95199598 ZIC1 JASPAR yes 129211379
Genes associated with rs12245616[chr10:95199589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More