EnhancerDB
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  3. rs12253966[chr10:32049290]
Enhancers that have rs12253966[chr10:32049290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 32032398 32053515 enh1162
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
chr10 32048872 32049424 vista7052
VISTA
Transcript factors that have rs12253966[chr10:32049290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 32048640 32049636 POLR2A UCSC Txn Factor no Conserved 107907712
chr10 32048648 32049308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427258
chr10 32048648 32049308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907713
chr10 32048875 32049331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907741
chr10 32048894 32049298 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427267
chr10 32048894 32049298 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907744
chr10 32048908 32049582 ZBTB33 GTRD no Brain (SK-N-SH) 21427268
chr10 32048908 32049582 ZBTB33 GTRD no Brain (SK-N-SH) 107907745
chr10 32048914 32049350 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907747
chr10 32048961 32049705 ZBTB33 GTRD no Brain (SK-N-SH) 21427269
chr10 32048961 32049705 ZBTB33 GTRD no Brain (SK-N-SH) 107907750
chr10 32048961 32049705 ZBTB33 GTRD no Brain (SK-N-SH) 107907751
chr10 32049002 32049326 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907752
chr10 32049003 32049363 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907753
chr10 32049010 32049606 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21427270
chr10 32049010 32049606 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107907754
chr10 32049031 32049407 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427271
chr10 32049031 32049407 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907755
chr10 32049033 32049413 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907756
chr10 32049036 32049426 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107907757
chr10 32049041 32049377 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107907758
chr10 32049045 32049415 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427272
chr10 32049045 32049415 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907759
chr10 32049048 32049348 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907760
chr10 32049071 32049383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907761
chr10 32049071 32049396 NFYB UCSC Txn Factor no Conserved 107907762
chr10 32049073 32049577 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427273
chr10 32049073 32049577 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907763
chr10 32049081 32049405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107907764
chr10 32049084 32049324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907765
chr10 32049093 32049363 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907766
chr10 32049093 32049613 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907767
chr10 32049098 32049368 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907768
chr10 32049109 32049293 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107907769
chr10 32049119 32049439 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907770
chr10 32049120 32049444 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907771
chr10 32049130 32049396 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907772
chr10 32049134 32049630 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107907773
chr10 32049136 32049512 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21427274
chr10 32049136 32049512 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107907774
chr10 32049140 32049470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427275
chr10 32049140 32049470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907775
chr10 32049143 32049503 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907776
chr10 32049145 32049325 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907777
chr10 32049145 32049541 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427276
chr10 32049145 32049541 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907778
chr10 32049146 32049422 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107907779
chr10 32049192 32049401 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107907780
chr10 32049204 32049426 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907781
chr10 32049206 32049394 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427277
chr10 32049206 32049394 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907782
chr10 32049206 32049530 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907783
chr10 32049216 32049357 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907784
chr10 32049247 32049511 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107907785
chr10 32049289 32049433 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21427278
chr10 32049289 32049433 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107907786
Genes associated with rs12253966[chr10:32049290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More