EnhancerDB
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  3. rs12269930[chr11:122559333]
Enhancers that have rs12269930[chr11:122559333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12269930[chr11:122559333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122559317 122559338 IRF1 JASPAR yes 42019627
chr11 122559321 122559342 IRF1 JASPAR yes 42019628
chr11 122559323 122559344 IRF1 JASPAR yes 42019629
chr11 122559327 122559348 IRF1 JASPAR yes 42019630
Genes associated with rs12269930[chr11:122559333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More