EnhancerDB
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  3. rs12281782[chr11:122555767]
Enhancers that have rs12281782[chr11:122555767]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12281782[chr11:122555767]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122555763 122555775 TFAP2A JASPAR yes 42019042
chr11 122555763 122555775 TFAP2B JASPAR yes 42019043
chr11 122555763 122555775 TFAP2C JASPAR yes 42019044
chr11 122555763 122555777 GLIS2 JASPAR yes 42019045
chr11 122555763 122555777 GLIS3 JASPAR yes 42019046
chr11 122555763 122555778 TFAP2A JASPAR yes 42019047
chr11 122555765 122555774 TFAP2A JASPAR yes 42019048
Genes associated with rs12281782[chr11:122555767], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More