EnhancerDB
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  3. rs1229399[chr1:167592743]
Enhancers that have rs1229399[chr1:167592743]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167582705 167593415 enh716
Bone Marrow (K562) Skin (Keratinocyte) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1229399[chr1:167592743]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167592731 167592746 HNF1A JASPAR yes 32879303
chr1 167592739 167592754 IRF9 JASPAR yes 32879304
chr1 167592740 167592754 IRF8 JASPAR yes 32879305
chr1 167592741 167592756 STAT2 JASPAR yes 32879306
chr1 167592742 167592754 IRF1 JASPAR yes 32879307
Genes associated with rs1229399[chr1:167592743], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More