EnhancerDB
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  3. rs1229403[chr1:167589943]
Enhancers that have rs1229403[chr1:167589943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167582705 167593415 enh716
Bone Marrow (K562) Skin (Keratinocyte) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1229403[chr1:167589943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167589931 167589949 RARA JASPAR yes 32878902
chr1 167589933 167589946 DUXA JASPAR yes 32878903
chr1 167589937 167589945 GATA5 JASPAR yes 32878905
Genes associated with rs1229403[chr1:167589943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 167599330 167675486 + RCSD1 ENSG00000198771.6 167599330 9387 Spleen 0.017875 1532