EnhancerDB
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  3. rs12298771[chr12:116977797]
Enhancers that have rs12298771[chr12:116977797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 116977765 116977838 vista15038
VISTA
Transcript factors that have rs12298771[chr12:116977797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116977438 116978345 ZNF274 GTRD no Blood (GM12878) 21577350
chr12 116977438 116978345 ZNF274 GTRD no Blood (GM12878) 108061769
chr12 116977491 116978438 ZNF274 GTRD no Blood (GM12878) 21577351
chr12 116977491 116978438 ZNF274 GTRD no Blood (GM12878) 108061770
chr12 116977662 116978332 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108061771
chr12 116977676 116978397 MEF2B GTRD no Blood (Karpas-422) 108061772
chr12 116977788 116977798 ETV6 JASPAR yes 82484069
chr12 116977788 116977798 ETV6 JASPAR yes 124008960
chr12 116977793 116977802 TFAP2A JASPAR yes 82484070
chr12 116977793 116977802 TFAP2A JASPAR yes 124008961
Genes associated with rs12298771[chr12:116977797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More