EnhancerDB
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  3. rs12328590[chr2:240206263]
Enhancers that have rs12328590[chr2:240206263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12328590[chr2:240206263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240206249 240206264 TFAP2A JASPAR yes 82225749
chr2 240206249 240206264 TFAP2C JASPAR yes 82225750
chr2 240206252 240206264 TFAP2A JASPAR yes 82225752
chr2 240206252 240206264 TFAP2B JASPAR yes 82225753
chr2 240206252 240206264 TFAP2C JASPAR yes 82225754
chr2 240206256 240206265 HIC2 JASPAR yes 82225755
chr2 240206259 240206263 LFA1 TRANSFAC yes 82225756
chr2 240206260 240206270 ERG JASPAR yes 82225757
chr2 240206260 240206270 ETS1 JASPAR yes 82225758
chr2 240206260 240206270 ETV1 JASPAR yes 82225759
chr2 240206260 240206270 ETV3 JASPAR yes 82225760
chr2 240206260 240206270 ETV4 JASPAR yes 82225761
chr2 240206260 240206270 ETV5 JASPAR yes 82225762
chr2 240206260 240206270 FEV JASPAR yes 82225763
chr2 240206260 240206270 FLI1 JASPAR yes 82225764
chr2 240206261 240206270 ELK4 JASPAR yes 82225765
Genes associated with rs12328590[chr2:240206263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More