EnhancerDB
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  3. rs12333083[chr6:88436158]
Enhancers that have rs12333083[chr6:88436158]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12333083[chr6:88436158]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88436151 88436160 SNAI2 JASPAR yes 103325444
chr6 88436151 88436161 ID4 JASPAR yes 103325445
chr6 88436151 88436161 TCF3 JASPAR yes 103325446
chr6 88436151 88436161 TCF4 JASPAR yes 103325447
Genes associated with rs12333083[chr6:88436158], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More