EnhancerDB
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  3. rs12402601[chr1:117399242]
Enhancers that have rs12402601[chr1:117399242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12402601[chr1:117399242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117398864 117399479 ZNF274 GTRD no Bone Marrow (K562) 21333975
chr1 117398876 117399418 ZNF274 GTRD no Bone Marrow (K562) 21333976
chr1 117399238 117399248 TEAD1 JASPAR yes 31845191
chr1 117399238 117399248 TEAD4 JASPAR yes 31845192
chr1 117399238 117399250 TEAD1 JASPAR yes 31845193
chr1 117399239 117399247 TEAD3 JASPAR yes 31845194
Genes associated with rs12402601[chr1:117399242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More