EnhancerDB
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  3. rs12404362[chr1:19739958]
Enhancers that have rs12404362[chr1:19739958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12404362[chr1:19739958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19739945 19739964 RFX2 JASPAR yes 27187248
chr1 19739947 19739959 HNF1B JASPAR yes 27187249
chr1 19739950 19739970 PPARG JASPAR yes 27187250
chr1 19739955 19739958 MYB TRANSFAC yes 27187251
Genes associated with rs12404362[chr1:19739958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More