EnhancerDB
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  3. rs12404715[chr1:33452342]
Enhancers that have rs12404715[chr1:33452342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
Transcript factors that have rs12404715[chr1:33452342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33452329 33452342 NFKB1 JASPAR yes 28019506
chr1 33452329 33452342 NFKB2 JASPAR yes 28019507
chr1 33452337 33452342 MYC TRANSFAC yes 28019508
Genes associated with rs12404715[chr1:33452342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More