EnhancerDB
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  3. rs12405176[chr1:19757506]
Enhancers that have rs12405176[chr1:19757506]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12405176[chr1:19757506]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19757503 19757514 FOXH1 JASPAR yes 27189247
chr1 19757503 19757518 FOXA1 JASPAR yes 27189248
chr1 19757506 19757521 SCRT1 JASPAR yes 27189249
Genes associated with rs12405176[chr1:19757506], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More