EnhancerDB
  1. Home
  2. SNP
  3. rs12406046[chr1:181067916]
Enhancers that have rs12406046[chr1:181067916]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12406046[chr1:181067916]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181067903 181067916 ZBTB18 JASPAR yes 33552297
chr1 181067904 181067916 PKNOX1 JASPAR yes 33552298
chr1 181067904 181067916 TGIF1 JASPAR yes 33552299
chr1 181067907 181067916 ZEB1 JASPAR yes 33552305
chr1 181067907 181067917 TBX21 JASPAR yes 33552306
chr1 181067908 181067916 MGA JASPAR yes 33552307
chr1 181067908 181067916 TBX15 JASPAR yes 33552308
chr1 181067908 181067916 TBX1 JASPAR yes 33552309
chr1 181067908 181067916 TBX4 JASPAR yes 33552310
chr1 181067908 181067916 TBX5 JASPAR yes 33552311
chr1 181067908 181067918 TBR1 JASPAR yes 33552312
chr1 181067908 181067921 SMAD2 JASPAR yes 33552313
Genes associated with rs12406046[chr1:181067916], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More