EnhancerDB
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  3. rs12407089[chr1:19767814]
Enhancers that have rs12407089[chr1:19767814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12407089[chr1:19767814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19767811 19767816 TFAP2A TRANSFAC yes 27190665
chr1 19767811 19767817 MZF1 JASPAR yes 27190666
chr1 19767812 19767832 TP53 JASPAR yes 27190667
Genes associated with rs12407089[chr1:19767814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More