EnhancerDB
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  3. rs12410955[chr1:226866136]
Enhancers that have rs12410955[chr1:226866136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12410955[chr1:226866136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226865630 226866348 ZNF274 GTRD no Cervix (HeLa-S3) 21387049
chr1 226865630 226866348 ZNF274 GTRD no Cervix (HeLa-S3) 107875917
chr1 226865873 226866484 ZBTB33 GTRD no Brain (SK-N-SH) 21387050
chr1 226865873 226866484 ZBTB33 GTRD no Brain (SK-N-SH) 107875918
chr1 226865918 226866362 ZBTB33 GTRD no Lung (A549) 107875919
chr1 226866038 226866381 ZBTB33 GTRD no Brain (SK-N-SH) 21387051
chr1 226866038 226866381 ZBTB33 GTRD no Brain (SK-N-SH) 107875920
chr1 226866127 226866541 TCF7L2 GTRD no Colon (HCT116) 21387052
chr1 226866127 226866541 TCF7L2 GTRD no Colon (HCT116) 107875921
chr1 226866130 226866139 THAP1 JASPAR yes 35831835
chr1 226866130 226866145 HNF4G JASPAR yes 35831836
chr1 226866130 226866145 NR2C2 JASPAR yes 35831837
chr1 226866131 226866146 HNF4A JASPAR yes 35831838
chr1 226866133 226866137 LFA1 TRANSFAC yes 35831839
Genes associated with rs12410955[chr1:226866136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More