EnhancerDB
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  3. rs12420438[chr11:9625196]
Enhancers that have rs12420438[chr11:9625196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 9615493 9643875 enh1632
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12420438[chr11:9625196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 9624941 9625895 P63 GTRD no Skin (Keratinocyte) 21468721
chr11 9624998 9625804 P63 GTRD no Skin (Keratinocyte) 21468722
chr11 9625067 9625734 P63 GTRD no Skin (Keratinocyte) 21468723
chr11 9625188 9625200 ZBTB7B JASPAR yes 37254415
chr11 9625188 9625200 ZBTB7C JASPAR yes 37254416
chr11 9625190 9625203 NFKB1 JASPAR yes 37254417
chr11 9625190 9625203 NFKB2 JASPAR yes 37254418
chr11 9625191 9625202 NFKB1 JASPAR yes 37254419
Genes associated with rs12420438[chr11:9625196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More