EnhancerDB
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  3. rs12421957[chr11:122555668]
Enhancers that have rs12421957[chr11:122555668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12421957[chr11:122555668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122555660 122555671 NFIL3 JASPAR yes 42019024
chr11 122555661 122555673 DBP JASPAR yes 42019025
chr11 122555661 122555673 HLF JASPAR yes 42019026
chr11 122555661 122555673 TEF JASPAR yes 42019027
chr11 122555663 122555674 NFIL3 JASPAR yes 42019028
chr11 122555666 122555670 TEAD2 TRANSFAC yes 42019029
chr11 122555668 122555671 MYB TRANSFAC yes 42019030
Genes associated with rs12421957[chr11:122555668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More