EnhancerDB
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  3. rs12425271[chr12:65998232]
Enhancers that have rs12425271[chr12:65998232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65985125 66011195 enh47591
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs12425271[chr12:65998232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65996923 66000321 ZBTB33 GTRD no Brain (SK-N-SH) 108042117
chr12 65997749 66000262 ZBTB33 GTRD no Brain (SK-N-SH) 108042131
chr12 65997889 65998311 ZBTB33 GTRD no Brain (SK-N-SH) 108042137
chr12 65997909 65998994 ZBTB33 GTRD no Brain (SK-N-SH) 108042138
chr12 65997925 65998528 ZBTB33 GTRD no Brain (SK-N-SH) 108042139
chr12 65997927 65999129 ZBTB33 GTRD no Brain (SK-N-SH) 108042140
chr12 65998058 65998432 ZNF143 GTRD no Epithelial (MCF-7) 21553149
chr12 65998058 65998432 ZNF143 GTRD no Epithelial (MCF-7) 108042141
chr12 65998062 65998492 ZNF143 GTRD no Epithelial (MCF-7) 21553150
chr12 65998062 65998492 ZNF143 GTRD no Epithelial (MCF-7) 108042142
chr12 65998230 65998234 YY1 TRANSFAC yes 121474468
Genes associated with rs12425271[chr12:65998232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More