EnhancerDB
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  3. rs12442920[chr15:55512611]
Enhancers that have rs12442920[chr15:55512611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12442920[chr15:55512611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55512605 55512614 SNAI2 JASPAR yes 23494047
chr15 55512605 55512615 ID4 JASPAR yes 23494048
chr15 55512605 55512615 TCF3 JASPAR yes 23494049
chr15 55512605 55512615 TCF4 JASPAR yes 23494050
chr15 55512610 55512619 HIC2 JASPAR yes 23494051
Genes associated with rs12442920[chr15:55512611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More