EnhancerDB
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Enhancers that have rs1244872[chr12:65074345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 65074143 65074354 vista13805
VISTA
Transcript factors that have rs1244872[chr12:65074345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65074038 65074398 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552912
chr12 65074038 65074398 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041928
chr12 65074050 65074446 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552913
chr12 65074050 65074446 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041930
chr12 65074067 65074377 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21552914
chr12 65074067 65074377 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108041931
chr12 65074090 65074500 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108041932
chr12 65074150 65074414 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21552916
chr12 65074150 65074414 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108041934
chr12 65074172 65074428 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108041935
chr12 65074336 65074350 EBF1 JASPAR yes 82422854
chr12 65074336 65074350 EBF1 JASPAR yes 121425675
chr12 65074343 65074356 NFKB2 JASPAR yes 82422855
chr12 65074343 65074356 NFKB2 JASPAR yes 121425676
Genes associated with rs1244872[chr12:65074345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More