EnhancerDB
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  3. rs12450321[chr17:43248581]
Enhancers that have rs12450321[chr17:43248581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs12450321[chr17:43248581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43247783 43250788 POLR2A UCSC Txn Factor no Conserved 108263878
chr17 43248242 43248598 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21763180
chr17 43248264 43248668 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763181
chr17 43248311 43248641 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763182
chr17 43248365 43248582 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763183
chr17 43248496 43248972 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763184
chr17 43248568 43248583 STAT1 JASPAR yes 54432670
chr17 43248570 43248581 STAT1 JASPAR yes 54432671
Genes associated with rs12450321[chr17:43248581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More