EnhancerDB
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  3. rs1245180[chr12:65058612]
Enhancers that have rs1245180[chr12:65058612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1245180[chr12:65058612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65058602 65058617 LEF1 JASPAR yes 121423155
chr12 65058604 65058618 ONECUT1 JASPAR yes 121423156
chr12 65058604 65058618 ONECUT2 JASPAR yes 121423157
chr12 65058604 65058618 ONECUT3 JASPAR yes 121423158
Genes associated with rs1245180[chr12:65058612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More