EnhancerDB
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  3. rs12474317[chr2:227511381]
Enhancers that have rs12474317[chr2:227511381]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12474317[chr2:227511381]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227511374 227511387 ZBTB18 JASPAR yes 81478095
chr2 227511375 227511385 FIGLA JASPAR yes 81478096
chr2 227511375 227511385 ID4 JASPAR yes 81478097
chr2 227511375 227511385 TCF3 JASPAR yes 81478098
chr2 227511375 227511385 TCF4 JASPAR yes 81478099
chr2 227511377 227511382 USF2 TRANSFAC yes 81478100
Genes associated with rs12474317[chr2:227511381], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More