EnhancerDB
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  3. rs1247442[chr10:29899946]
Enhancers that have rs1247442[chr10:29899946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29894589 29921854 enh13094
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs1247442[chr10:29899946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29899929 29899948 RFX2 JASPAR yes 126331053
chr10 29899933 29899949 RFX2 JASPAR yes 126331060
chr10 29899933 29899949 RFX3 JASPAR yes 126331061
chr10 29899933 29899949 RFX4 JASPAR yes 126331062
chr10 29899933 29899949 RFX5 JASPAR yes 126331063
chr10 29899942 29899947 GATA2 JASPAR yes 126331064
Genes associated with rs1247442[chr10:29899946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More