EnhancerDB
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  3. rs1247446[chr10:29919220]
Enhancers that have rs1247446[chr10:29919220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29894589 29921854 enh13094
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Breast Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs1247446[chr10:29919220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29919089 29919397 TEF1 GTRD no Bone (Osteoblast) 107905906
chr10 29919110 29919606 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21424752
chr10 29919110 29919606 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107905907
chr10 29919125 29919341 FOXA1 UCSC Txn Factor no Conserved 107905908
chr10 29919125 29919695 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21424753
chr10 29919125 29919695 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107905909
chr10 29919206 29919221 FOXA1 JASPAR yes 126333905
chr10 29919207 29919223 SRF JASPAR yes 126333908
chr10 29919213 29919226 POU3F3 JASPAR yes 126333909
chr10 29919213 29919227 POU1F1 JASPAR yes 126333910
chr10 29919215 29919225 NFATC3 JASPAR yes 126333911
chr10 29919218 29919688 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21424754
chr10 29919218 29919688 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107905910
Genes associated with rs1247446[chr10:29919220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More