EnhancerDB
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  3. rs12489440[chr3:133965189]
Enhancers that have rs12489440[chr3:133965189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 133948305 133965788 enh59237
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Liver Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs12489440[chr3:133965189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 133965170 133965190 RREB1 JASPAR yes 5866282
chr3 133965172 133965192 RREB1 JASPAR yes 5866283
chr3 133965185 133965206 IRF1 JASPAR yes 5866284
chr3 133965189 133965204 PRDM1 JASPAR yes 5866285
Genes associated with rs12489440[chr3:133965189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More