EnhancerDB
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  3. rs12490241[chr3:57052305]
Enhancers that have rs12490241[chr3:57052305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57012585 57055453 enh7240
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12490241[chr3:57052305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57052295 57052306 NFE2L2 JASPAR yes 2623317
chr3 57052303 57052318 FOXP1 JASPAR yes 2623319
chr3 57052304 57052319 FOXP1 JASPAR yes 2623320
chr3 57052304 57052325 IRF1 JASPAR yes 2623321
chr3 57052305 57052320 FOXP1 JASPAR yes 2623322
chr3 57052305 57052326 IRF1 JASPAR yes 2623323
Genes associated with rs12490241[chr3:57052305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More