EnhancerDB
  1. Home
  2. SNP
  3. rs12563566[chr1:23447610]
Enhancers that have rs12563566[chr1:23447610]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs12563566[chr1:23447610]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23447601 23447616 FOXP1 JASPAR yes 27415007
chr1 23447603 23447614 FOXC1 JASPAR yes 27415008
chr1 23447603 23447615 FOXC2 JASPAR yes 27415009
chr1 23447604 23447615 FOXP2 JASPAR yes 27415010
chr1 23447605 23447610 TBP TRANSFAC yes 27415012
chr1 23447606 23447614 FOXG1 JASPAR yes 27415013
chr1 23447606 23447614 FOXO3 JASPAR yes 27415014
chr1 23447610 23447616 SOX10 JASPAR yes 27415015
Genes associated with rs12563566[chr1:23447610], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More