EnhancerDB
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  3. rs12565219[chr1:244488671]
Enhancers that have rs12565219[chr1:244488671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244477784 244495570 enh12850
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs12565219[chr1:244488671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244488246 244488686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21405441
chr1 244488300 244488680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405445
chr1 244488305 244488685 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21405446
chr1 244488562 244489098 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21405452
chr1 244488657 244488671 NR2F1 JASPAR yes 36727797
chr1 244488667 244488987 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21405453
Genes associated with rs12565219[chr1:244488671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More