EnhancerDB
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  3. rs12595954[chr16:88832586]
Enhancers that have rs12595954[chr16:88832586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12595954[chr16:88832586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88831653 88832606 ZNF143 GTRD no Epithelial (MCF-7) 21736938
chr16 88831653 88832606 ZNF143 GTRD no Epithelial (MCF-7) 108223392
chr16 88832581 88832594 ZBTB18 JASPAR yes 12301812
chr16 88832583 88832592 SNAI2 JASPAR yes 12301813
chr16 88832583 88832593 FIGLA JASPAR yes 12301814
chr16 88832583 88832593 ID4 JASPAR yes 12301815
chr16 88832583 88832593 TCF3 JASPAR yes 12301816
chr16 88832583 88832593 TCF4 JASPAR yes 12301817
Genes associated with rs12595954[chr16:88832586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More