EnhancerDB
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  3. rs12596754[chr16:85247779]
Enhancers that have rs12596754[chr16:85247779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12596754[chr16:85247779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85246384 85248347 TCF7L2 GTRD no Colon (HCT116) 21721335
chr16 85246965 85247978 ZNF274 GTRD no Bone Marrow (K562) 21721340
chr16 85247163 85247925 TCF7L2 GTRD no Colon (HCT116) 21721344
chr16 85247326 85248291 TCF7L2 GTRD no Colon (HCT116) 21721346
chr16 85247753 85248183 ZNF274 GTRD no Bone Marrow (K562) 21721349
chr16 85247767 85247783 GLIS1 JASPAR yes 12033567
chr16 85247769 85247781 ZBTB7A JASPAR yes 12033568
chr16 85247774 85247779 SP1 TRANSFAC yes 12033569
Genes associated with rs12596754[chr16:85247779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More