EnhancerDB
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  3. rs12598646[chr16:11406519]
Enhancers that have rs12598646[chr16:11406519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs12598646[chr16:11406519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11405055 11406530 ZNF274 GTRD no Cervix (HeLa-S3) 21690452
chr16 11405055 11406530 ZNF274 GTRD no Cervix (HeLa-S3) 108181304
chr16 11406518 11406533 HNF4G JASPAR yes 9504995
chr16 11406519 11406534 HNF4A JASPAR yes 9504996
Genes associated with rs12598646[chr16:11406519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More