EnhancerDB
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  3. rs12600414[chr17:56028392]
Enhancers that have rs12600414[chr17:56028392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12600414[chr17:56028392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56028381 56028398 PAX1 JASPAR yes 55003981
chr17 56028381 56028398 PAX9 JASPAR yes 55003982
Genes associated with rs12600414[chr17:56028392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0 Esophagus 0.11222 16075
chr17 55938604 56032684 - CUEDC1 ENSG00000180891.8 56032684 0 Adrenal 0.00186271 16075