EnhancerDB
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  3. rs12602727[chr17:76306786]
Enhancers that have rs12602727[chr17:76306786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76294130 76316355 enh17406
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs12602727[chr17:76306786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76303874 76310233 ZNF274 GTRD no Liver (HepG2) 108301842
chr17 76306151 76308527 TCF7L2 GTRD no Colon (HCT116) 21793219
chr17 76306333 76308490 TCF7L2 GTRD no Colon (HCT116) 21793220
chr17 76306392 76306907 TCF7L2 GTRD no Colon (HCT116) 21793221
chr17 76306769 76306790 IRF1 JASPAR yes 56145026
chr17 76306770 76306791 IRF1 JASPAR yes 56145028
chr17 76306771 76306786 FOXP1 JASPAR yes 56145029
chr17 76306771 76306792 IRF1 JASPAR yes 56145030
chr17 76306772 76306787 FOXP1 JASPAR yes 56145031
chr17 76306782 76306795 POU2F2 JASPAR yes 56145032
Genes associated with rs12602727[chr17:76306786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More