EnhancerDB
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  3. rs1262916[chr6:16729525]
Enhancers that have rs1262916[chr6:16729525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16729304 16729629 vista51174
VISTA
Transcript factors that have rs1262916[chr6:16729525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16729332 16729733 TCF7L2 UCSC Txn Factor no Conserved 108538913
chr6 16729450 16729770 FOXA1 UCSC Txn Factor no Conserved 108538914
chr6 16729454 16729684 FOSL2 UCSC Txn Factor no Conserved 108538915
chr6 16729522 16729532 SREBF1 JASPAR yes 70327103
chr6 16729522 16729532 SREBF2 JASPAR yes 70327104
chr6 16729522 16729532 SREBF1 JASPAR yes 100334136
chr6 16729522 16729532 SREBF2 JASPAR yes 100334137
Genes associated with rs1262916[chr6:16729525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More