EnhancerDB
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  3. rs12654097[chr5:172274812]
Enhancers that have rs12654097[chr5:172274812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12654097[chr5:172274812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172274802 172274812 SP1 JASPAR yes 67834175
chr5 172274810 172274823 ZBTB18 JASPAR yes 67834177
chr5 172274811 172274821 MAX JASPAR yes 67834178
chr5 172274811 172274822 USF2 JASPAR yes 67834179
Genes associated with rs12654097[chr5:172274812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More