EnhancerDB
  1. Home
  2. SNP
  3. rs12657491[chr5:77808578]
Enhancers that have rs12657491[chr5:77808578]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs12657491[chr5:77808578]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77808571 77808582 PHOX2A JASPAR yes 63594846
chr5 77808573 77808594 IRF1 JASPAR yes 63594847
chr5 77808574 77808595 IRF1 JASPAR yes 63594848
Genes associated with rs12657491[chr5:77808578], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More