EnhancerDB
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  3. rs12660684[chr6:16669700]
Enhancers that have rs12660684[chr6:16669700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16669504 16669854 vista51161
VISTA
Transcript factors that have rs12660684[chr6:16669700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16669522 16669745 RUNX3 UCSC Txn Factor no Conserved 108538893
chr6 16669686 16669704 SRF JASPAR yes 70326415
chr6 16669686 16669704 SRF JASPAR yes 100324608
chr6 16669696 16669711 MEF2A JASPAR yes 70326417
chr6 16669696 16669711 MEF2A JASPAR yes 100324610
chr6 16669697 16669712 MEF2C JASPAR yes 70326418
chr6 16669697 16669712 MEF2C JASPAR yes 100324611
chr6 16669698 16669710 MEF2B JASPAR yes 70326419
chr6 16669698 16669710 MEF2B JASPAR yes 100324612
chr6 16669700 16669704 YY1 TRANSFAC yes 70326420
chr6 16669700 16669704 YY1 TRANSFAC yes 100324613
Genes associated with rs12660684[chr6:16669700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More