EnhancerDB
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  3. rs12663313[chr6:30749054]
Enhancers that have rs12663313[chr6:30749054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs12663313[chr6:30749054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30749048 30749058 SP1 JASPAR yes 101048565
chr6 30749051 30749056 SP1 TRANSFAC yes 101048566
chr6 30749054 30749064 EN2 JASPAR yes 101048567
chr6 30749054 30749064 ESX1 JASPAR yes 101048568
chr6 30749054 30749064 GBX1 JASPAR yes 101048569
chr6 30749054 30749064 GSX1 JASPAR yes 101048570
chr6 30749054 30749064 GSX2 JASPAR yes 101048571
chr6 30749054 30749064 LBX2 JASPAR yes 101048572
chr6 30749054 30749064 LHX2 JASPAR yes 101048573
chr6 30749054 30749064 RAX JASPAR yes 101048574
Genes associated with rs12663313[chr6:30749054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More