EnhancerDB
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  3. rs12711516[chr1:8181227]
Enhancers that have rs12711516[chr1:8181227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr1 8181009 8181247 vista225
VISTA
Transcript factors that have rs12711516[chr1:8181227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8180581 8181362 EP300 UCSC Txn Factor no Conserved 107801953
chr1 8181218 8181233 TFAP2A JASPAR yes 26515692
chr1 8181218 8181233 TFAP2A JASPAR yes 118224009
chr1 8181221 8181233 TFAP2C JASPAR yes 26515693
chr1 8181221 8181233 TFAP2C JASPAR yes 118224010
Genes associated with rs12711516[chr1:8181227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More