EnhancerDB
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  3. rs1272427[chr6:109059067]
Enhancers that have rs1272427[chr6:109059067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 109044985 109078935 enh23481
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs1272427[chr6:109059067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 109059050 109059071 IRF1 JASPAR yes 104199764
chr6 109059051 109059072 IRF1 JASPAR yes 104199766
chr6 109059052 109059067 FOXP1 JASPAR yes 104199767
chr6 109059052 109059073 IRF1 JASPAR yes 104199768
chr6 109059053 109059068 FOXP1 JASPAR yes 104199769
chr6 109059053 109059074 IRF1 JASPAR yes 104199770
chr6 109059054 109059069 FOXP1 JASPAR yes 104199771
chr6 109059054 109059075 IRF1 JASPAR yes 104199772
chr6 109059055 109059070 FOXP1 JASPAR yes 104199773
chr6 109059057 109059072 FOXP1 JASPAR yes 104199774
chr6 109059057 109059078 IRF1 JASPAR yes 104199775
chr6 109059060 109059081 IRF1 JASPAR yes 104199776
chr6 109059061 109059075 SPI1 JASPAR yes 104199777
chr6 109059064 109059078 SPI1 JASPAR yes 104199778
chr6 109059066 109059087 IRF1 JASPAR yes 104199779
Genes associated with rs1272427[chr6:109059067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More