EnhancerDB
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  3. rs12730855[chr1:203259173]
Enhancers that have rs12730855[chr1:203259173]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203258547 203259334 vista4626
VISTA
Transcript factors that have rs12730855[chr1:203259173]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367893
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858336
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858337
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858338
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858339
chr1 203258615 203259179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367900
chr1 203258615 203259179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858349
chr1 203258762 203259352 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367948
chr1 203258762 203259352 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858407
chr1 203258764 203259180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21367950
chr1 203258764 203259180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107858409
chr1 203258882 203259318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367967
chr1 203258882 203259318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858427
chr1 203258899 203259335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367968
chr1 203258899 203259335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858428
chr1 203259172 203259177 TFAP2A TRANSFAC yes 34614303
chr1 203259172 203259177 TFAP2A TRANSFAC yes 118435217
chr1 203259172 203259178 MZF1 JASPAR yes 34614304
chr1 203259172 203259178 MZF1 JASPAR yes 118435218
chr1 203259172 203259572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367969
chr1 203259172 203259572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858429
chr1 203259172 203259572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858430
Genes associated with rs12730855[chr1:203259173], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More