EnhancerDB
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  3. rs12741667[chr1:168442581]
Enhancers that have rs12741667[chr1:168442581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs12741667[chr1:168442581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168442329 168443010 ZNF143 GTRD no Epithelial (MCF-7) 21348260
chr1 168442341 168442973 ZNF143 GTRD no Epithelial (MCF-7) 21348261
chr1 168442343 168443013 ZNF143 GTRD no Epithelial (MCF-7) 21348262
chr1 168442366 168443108 ZNF143 GTRD no Epithelial (MCF-7) 21348263
chr1 168442396 168442672 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348264
chr1 168442426 168442807 ZNF143 GTRD no Epithelial (MCF-7) 21348265
chr1 168442437 168442746 ZNF143 GTRD no Epithelial (MCF-7) 21348266
chr1 168442574 168442584 ETV6 JASPAR yes 32929046
chr1 168442574 168442588 SPI1 JASPAR yes 32929047
chr1 168442577 168442587 MZF1 JASPAR yes 32929048
chr1 168442578 168442599 ZNF263 JASPAR yes 32929049
chr1 168442579 168442600 ZNF263 JASPAR yes 32929050
Genes associated with rs12741667[chr1:168442581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More