EnhancerDB
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  3. rs12748139[chr1:27865963]
Enhancers that have rs12748139[chr1:27865963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs12748139[chr1:27865963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27865962 27865968 TCF4 TRANSFAC yes 27706812
chr1 27865962 27865974 FOXI1 JASPAR yes 27706813
chr1 27865962 27865977 FOXP1 JASPAR yes 27706814
Genes associated with rs12748139[chr1:27865963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More